Package: causalDisco
Title: Tools for Causal Discovery on Observational Data
Version: 1.1.0.9000
Authors@R: c(
    person(given = "Bjarke", family = "Hautop Kristensen", email = "bjarke.kristensen@sund.ku.dk", role = c("aut", "cre")),
    person(given = "Frederik", family = "Fabricius-Bjerre", email = "frederik@fabriciusbjerre.dk", role = "aut"),
    person(given = "Anne", family = "Helby Petersen", email = "ahpe@sund.ku.dk", role = "aut"),
    person(given = "Claus", family = "Thorn Ekstrøm", email = "ekstrom@sund.ku.dk", role = "aut"),
    person(given = "Tobias", family = "Ellegaard Larsen", email = "tobias.ellegaard@sund.ku.dk", role = "ctb")
  )
Description: Tools for causal structure learning from observational
        data, with emphasis on temporally ordered variables. The
        package implements the Temporal Peter–Clark (TPC) algorithm
        (Petersen, Osler & Ekstrøm, 2021; <doi:10.1093/aje/kwab087>),
        the Temporal Greedy Equivalence Search (TGES) algorithm
        (Larsen, Ekstrøm & Petersen, 2025;
        <doi:10.48550/arXiv.2502.06232>) and Temporal Fast Causal
        Inference (TFCI). It provides a unified framework for
        specifying background knowledge, which can be incorporated into
        the implemented algorithms from the R packages 'bnlearn'
        (Scutari, 2010; <doi:10.18637/jss.v035.i03>) and 'pcalg'
        (Kalish et al., 2012; <doi:10.18637/jss.v047.i11>), as well as
        the Java library 'Tetrad' (Scheines et al., 1998;
        <doi:10.1207/s15327906mbr3301_3>). The package further includes
        utilities for visualization, comparison, and evaluation of
        graph structures, facilitating performance evaluation and
        methodological studies.
License: GPL-2
URL: https://github.com/disco-coders/causalDisco,
        https://disco-coders.github.io/causalDisco/
BugReports: https://github.com/disco-coders/causalDisco/issues
Depends: R (>= 4.2.0)
Imports: bnlearn, caugi (>= 1.0.0), checkmate, cli, digest, dplyr,
        lifecycle, methods, pcalg, purrr, R6, rlang, S7, tibble, tidyr,
        tidyselect
Suggests: knitr, mockery, quarto, RhpcBLASctl, rJava, rmarkdown,
        spelling, testthat (>= 3.0.0), withr, mice, micd
VignetteBuilder: quarto
Config/testthat/edition: 3
Encoding: UTF-8
Language: en-US
LazyData: true
Roxygen: list(markdown = TRUE)
Config/Needs/website: quarto
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: libglpk-dev libicu-dev libxml2-dev xz-utils
        libclang-dev
Repository: https://disco-coders.r-universe.dev
Date/Publication: 2026-06-17 11:14:58 UTC
RemoteUrl: https://github.com/disco-coders/causaldisco
RemoteRef: HEAD
RemoteSha: 88c51a2fc4d27afe01e3f9fa4e2ded49093637eb
NeedsCompilation: no
Packaged: 2026-06-17 12:12:30 UTC; root
Author: Bjarke Hautop Kristensen [aut, cre],
  Frederik Fabricius-Bjerre [aut],
  Anne Helby Petersen [aut],
  Claus Thorn Ekstrøm [aut],
  Tobias Ellegaard Larsen [ctb]
Maintainer: Bjarke Hautop Kristensen <bjarke.kristensen@sund.ku.dk>